Research Data Analyst · Indiana University School of Medicine

Shubham Innani

Specializing in

AI-in-Healthcare researcher with 5+ years building interpretable deep learning pipelines for clinical digital pathology. Led development of a WSI diagnostic pipeline trained on 2,500+ multi-site cases, reducing diagnostic turnaround from weeks to minutes.

Featured in IU School of Medicine News: AI glioma identification research Read story
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8+
Journal Publications
6
International Presentations
🏆
Best Paper Award · CCBB 2025

Who I Am

Shubham Innani
SI
Computational Pathology
I specialize in

I am a Research Data Analyst in the Division of Computational Pathology at the Indiana University School of Medicine, where I translate AI research into diagnostic and prognostic tools.

My work centers on developing interpretable deep learning models for whole-slide image analysis, from WHO 2021 glioma classification to prognostic risk stratification, bridging the gap between computational research and real-world pathology workflows.

Previously at UPenn, I built multimodal GBM prognostic models achieving AUC around 0.75 across multi-institutional cohort. My research has been published in Neuro-Oncology, Modern Pathology, Nature Scientific Reports, and presented at MICCAI, SNO, ECDP, and AACR.

Whole-Slide Image Analysis Multiple Instance Learning Self-Supervised Learning Clinical AI Translation HPC / SLURM Pipelines Interpretable AI

Experience & Education

Experience

Dec 2023 - Present
Research Data Analyst
Indiana University, Indianapolis, USA

Led development of interpretable AI models for WSI diagnostic classification & prognostic stratification. Built GPU-backed inference pipeline (A6000/A100 SLURM) enabling 10-min/slide inference vs. multi-week molecular workflows.

Aug 2022 - Nov 2023
Visiting Associate
University of Pennsylvania, Philadelphia, USA

Developed multimodal GBM prognostic models (imaging + clinical features), AUC ~ 0.75 across multi-institutional cohorts. Co-authored manuscripts in Modern Pathology and Frontiers in Neuroscience.

Jan 2021 - Jul 2022
Assistant System Engineer
Tata Consultancy Services, Pune, India

QA for cloud migration of transaction modules (legacy → AWS / Java/Spring Boot) for a leading U.S. financial client. Led 6-person testing component across multi-team migration.

Mar 2020 - Jun 2020
Data Science Intern
Nymo.ai, Bangalore

Built edge inference pipelines for ANPR and mask-detection.

Education

B.Tech · Electronics & Telecommunication
Shri Guru Gobind Singhji Institute of Engineering & Technology, Nanded, India
2016 - 2020

Recent Presentations

2025
Podium & Poster - SNO 2025, Honolulu, HI
2025
Podium — ECDP 2025, Barcelona, Spain
2025
Poster — AACR 2025, Chicago, IL
2024
Podium — SNO 2024, Houston, TX
2024
2× Podium — ECDP 2024, Vilnius, Lithuania

Featured Work

WHO 2021 Glioma Classification

AI-driven classification of glioma subtypes directly from H&E-stained slides, validated on 2,500+ cases across 25+ sites. Published in Neuro-Oncology. Won Best Paper at CCBB 2025.

IDH Mutation Detection from Histology

Interpretable AI for glioma IDH mutation status prediction directly from WSI, removing dependency on expensive molecular testing. Published in Neuro-Oncology Advances.

View Publication

Multimodal GBM Prognostic Model

Multimodal explainable AI integrating imaging + clinical features for glioblastoma patient stratification. AUC ~ 0.75 on multi-institutional test set. Published in Modern Pathology.

View Publication

WSI Diagnostic Pipeline

End-to-end clinician-facing pipeline with GPU-backed inference (A100/H100 SLURM) enabling slide analysis in ~10 minutes vs. multi-week molecular workflows. Staged for IU Health clinical validation.

View Projects

Get In Touch

Open to research collaborations, speaking invitations, and discussions about AI in digital pathology.

Location
Indianapolis, IN, USA
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